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Search tool for Protein Motif Analysis

The tool is designed to identify short conserved protein sequence motifs in the human proteome, using a database processed from the genbank data available from NCBI.

The search can be initiated with atleast one of the following options:

The tool also gives additional flexibility to extend the functionality of the query, such as:

The search querys the Human Proteins database and returns the list of matching proteins plus a hyperlink to the list of its motifs of the corresponding protein.

The motifs are generated using an incremental sliding window approach, and is searched through the database to produce a list of motifs in descending order. The list comes with its corresponding number of hits in the database, plus a hyperlink to the detailed list of proteins that contains that motif, plus its sequence with the motif highlighted.

For further illustrations and examples, please visit our FAQs.

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